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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Khsrp, KH-type splicing regulatory protein
Sequence ID:NM_010613
Entrez Gene ID:16549
Ensembl ID:ENSMUSG00000007670

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 D|17 36.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 57021403 - 57024069

 Exon Info From UCSC:
NM_010613

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066322Full LengthBC166022KH-type splicing regulatory protein
6810039IncompleteBC064454KH-type splicing regulatory protein
6848894IncompleteBC108414KH-type splicing regulatory protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034743  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010613 NP_034743 Q3U0V1 KH_1
KH_2

Related Sequences

 
mRNAGenPeptSwissProt
BC064454 AAH64454 Q3U0V1
BC108414 AAI08415 Q3U0V1
BC166022 AAI66022  
AK018152 BAC25545 Q8CEN4
AK156541 BAE33750 Q3U0V1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Khsrp NP_034743 R.norvegicus Khsrp 171137   NP_598286 99
H.sapiens KHSRP 8570 Gene Info NP_003676 98
D.melanogaster Psi 36889   NP_477123 39
A.gambiae AgaP_AGAP011446 1278248   XP_317858 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)