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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. 4933426M11Rik, RIKEN cDNA 4933426M11 gene
Sequence ID:NM_001242419
NM_178682
Entrez Gene ID:217684
Ensembl ID:ENSMUSG00000021133

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12 D1|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 80790509 - 80877873

Transcript StartTranscript EndChromosomal Start Chromosomal End
12578189154581891801
2584758192901281929229
4766738196941381969610
6748098197106181971196
81012378197513581975562
123849758197808281981819

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4193723Full LengthBC040401RIKEN cDNA 4933426M11 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848797  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001242419 NP_001229348    
NM_178682 NP_848797 Q8BGE4 Sushi

Related Sequences

 
mRNAGenPeptSwissProt
BC040401 AAH40401 Q8BGE4
AK030233 BAC26857 Q8C0M5
AK054203 BAC35691 Q8BGE4
AK129100 BAC97910 Q6ZQF4
AK151939 BAE30815 Q3U749
AK152820 BAE31523 Q3U749
AK161132 BAE36207 Q8BGE4
AK164823 BAE37934 Q3TP03

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 4933426M11Rik NP_848797 H.sapiens KIAA0247 9766 Gene Info NP_055549 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)