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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccl7, chemokine (C-C motif) ligand 7
Sequence ID:NM_013654
Entrez Gene ID:20306
Ensembl ID:ENSMUSG00000035373

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11 46.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 82045746 - 82047117

NM_013654 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11488185921381859360
1492608186001981860130
2617978186048681861022

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30276350Full LengthBC061126chemokine (C-C motif) ligand 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038682  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013654 NP_038682 Q03366 IL8

Related Sequences

 
mRNAGenPeptSwissProt
S50588 AAA12542 A9Z1Z1
L04694 AAA37516 Q03366
S71251 AAB30997 Q03366
AF128193 AAF22534 Q03366
AF128194 AAF22535 Q03366
BC061126 AAH61126 Q03366
AK078827 BAC37413 Q03366
Z12297 CAA78169 Q03366

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccl7 NP_038682 R.norvegicus Ccl7 287561   NP_001007613 89
H.sapiens CCL7 6354 Gene Info NP_006264 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)