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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hsp90aa1, heat shock protein 90, alpha (cytosolic), class A member 1
Sequence ID:NM_010480
Entrez Gene ID:15519
Ensembl ID:ENSMUSG00000021270

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12 F1|12 48.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 110691035 - 110696395

 Exon Info From UCSC:
NM_010480

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4501952Full LengthBC094024heat shock protein 90, alpha (cytosolic), class A member 1
6491307Full LengthBC046614heat shock protein 90, alpha (cytosolic), class A member 1
6816250Full LengthBC049124heat shock protein 90, alpha (cytosolic), class A member 1
4504784IncompleteBC018232heat shock protein 90, alpha (cytosolic), class A member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034610  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010480 NP_034610 Q80Y52
P07901
HSP90
HATPase_c

Related Sequences

 
mRNAGenPeptSwissProt
M36830 AAA37868 P07901
BC018232 AAH18232 A0PJ91
BC046614 AAH46614 Q80Y52
P07901
BC049124 AAH49124 Q80Y52
P07901
BC094024 AAH94024 Q80Y52
P07901
AK004658 BAB23449 Q80Y52
P07901
AK077095 BAC36610 Q8C5U3
AK088975 BAC40681 Q8C2A9
AK146944 BAE27553 Q3UIF3
AK147641 BAE28042 Q80Y52
P07901
AK161276 BAE36287 Q80Y52
P07901
AK166696 BAE38952 Q3TKG0
AK166720 BAE38969 Q80Y52
P07901
AK166729 BAE38976 Q80Y52
P07901
AK166847 BAE39066 Q80Y52
P07901
AK166867 BAE39080 Q3TKB9
AK167008 BAE39185 Q3TKG0
AK167065 BAE39226 Q3TKB9
AK167086 BAE39243 Q3TKA2
AK167114 BAE39262 Q80Y52
P07901
AK167171 BAE39308 Q80Y52
P07901
AK167188 BAE39319 Q80Y52
P07901
AK167293 BAE39398 Q3TJU7
AK168605 BAE40472 Q80Y52
P07901
AK168620 BAE40484 Q80Y52
P07901
X16857 CAA34748 P07901

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hsp90aa1 NP_034610 R.norvegicus Hsp90aa1 299331   NP_786937 100
H.sapiens HSP90AA1 3320 Gene Info NP_001017963 99
A.thaliana HSP90.1 835341   NP_200076 74
N.crassa NCU04142 3877462   XP_961298 68
S.pombe hsp90 2543539   NP_594365 66
S.cerevisiae HSC82 855224   NP_013911 64
S.cerevisiae HSP82 855836   NP_015084 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta