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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Six5, sine oculis-related homeobox 5
Sequence ID:NM_011383
Entrez Gene ID:20475
Ensembl ID:ENSMUSG00000040841

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7 4.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 19096417 - 19096736

NM_011383 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18751967989219680766
87616631968158019682367
166428531968250419683693

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011383 NP_035513 P70178  

Related Sequences

 
mRNAGenPeptSwissProt
D83146 BAA11824 P70178

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Six5 NP_035513 H.sapiens SIX5 147912 Gene Info NP_787071 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)