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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lats1, large tumor suppressor
Sequence ID:NM_010690
Entrez Gene ID:16798
Ensembl ID:ENSMUSG00000040021

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 A1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 7701614 - 7713333

NM_010690 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
124274010067401247
24372274111327411611
72387074172997417446
871238174214077422917
2382296474252577425839
2965314774302627430444
3148325474306467430752
3255721574322987436258

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9088177Full LengthBC158092large tumor suppressor
9088196Full LengthBC158123large tumor suppressor

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_010690 NP_034820 Q8BYR2 EC 2.7.11.1  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF104414 AAD16883 Q8BYR2 EC 2.7.11.1
BC158092 AAI58093 Q8BYR2 EC 2.7.11.1
BC158123 AAI58124 Q8BYR2 EC 2.7.11.1
AK038612 BAC30063 Q8BYR2 EC 2.7.11.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lats1 NP_034820 R.norvegicus Lats1 308265   NP_001128015 98
H.sapiens LATS1 9113 Gene Info NP_004681 93
D.melanogaster wts 43651   NP_733403 53
A.gambiae AgaP_AGAP003618 1274280   XP_313377 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)