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Gene Info

Gene Information For:Mm. Atp6v0a1, ATPase, H+ transporting, lysosomal V0 subunit A1
Sequence ID:NM_001243049
NM_001243050
NM_001243051
NM_016920
Entrez Gene ID:11975
Ensembl ID:ENSMUSG00000019302

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 55.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 101011814 - 101063715


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30101184Full LengthBC071182ATPase, H+ transporting, lysosomal V0 subunit A1
30101340Full LengthBC066839ATPase, H+ transporting, lysosomal V0 subunit A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058616  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243049 NP_001229978    
NM_001243050 NP_001229979    
NM_001243051 NP_001229980 Q9Z1G4  
NM_016920 NP_058616   V_ATPase_I

Related Sequences

 
mRNAGenPeptSwissProt
U13836 AAC83083 Q9Z1G4
AF218249 AAF59918 Q9Z1G4
AF218250 AAF59919 Q9Z1G4
AF218251 AAF59920 Q9Z1G4
BC001995 AAH01995 Q99M55
BC066839 AAH66839 Q6NXX6
BC071182 AAH71182 Q6NXX6
AB022321 BAA93005 Q9Z1G4
AK040343 BAE20575 Q99M55
AK158786 BAE34665 Q3TY98
AK159114 BAE34830 Q3TXT5
AK166356 BAE38727 Q3TLR5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp6v0a1 NP_058616 R.norvegicus Atp6v0a1 29757   NP_113792 100
H.sapiens ATP6V0A1 535 Gene Info NP_001123493 96
A.gambiae AgaP_AGAP003711 1274390   XP_562586 64
D.melanogaster Vha100-1 43442   NP_001163768 63
C.elegans unc-32 176257   NP_001023017 61
A.thaliana VHA-A1 817400   NP_850122 45
S.cerevisiae VPH1 854444   NP_014913 45
N.crassa NCU03463 3872192   XP_956054 43
S.pombe vph1 2542310   NP_594219 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)