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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc13a5, solute carrier family 13 (sodium-dependent citrate transporter), member 5
Sequence ID:NM_001004148
Entrez Gene ID:237831
Ensembl ID:ENSMUSG00000020805

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B4|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 72252298 - 72266604

 Exon Info From UCSC:
NM_001004148

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062711Full LengthBC156915solute carrier family 13 (sodium-dependent citrate transporter), member 5
100062374BC156117solute carrier family 13 (sodium-dependent citrate transporter), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001004148  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001004148 NP_001004148 Q67BT3 Na_sulph_symp

Related Sequences

 
mRNAGenPeptSwissProt
BC156117 AAI56118  
BC156915 AAI56916  
AY368893 AAR14317 Q67BT3
AK043499 BAE20640 Q3V394
AK048662 BAE20664 Q67BT3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc13a5 NP_001004148 R.norvegicus Slc13a5 266998   NP_733768 86
H.sapiens SLC13A5 284111 Gene Info NP_808218 75
C.elegans nac-3 176429   NP_001022673 44
C.elegans nac-1 181585   NP_510473 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)