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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Aqp3, aquaporin 3
Sequence ID:NM_016689
Entrez Gene ID:11828
Ensembl ID:ENSMUSG00000028435

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 B1|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 41093518 - 41098100

NM_016689 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19794103975641040734
98011974104081441041031
119813164104129841041416
131714544104173341041870
145515814104217741042303
158217634104503441045215

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4951027Full LengthBC027400aquaporin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057898  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016689 NP_057898 Q8R2N1 MIP

Related Sequences

 
mRNAGenPeptSwissProt
AF104416 AAD20304 Q8R2N1
BC027400 AAH27400 Q8R2N1
AB019039 BAB03270 Q8R2N1
AK145678 BAE26584 Q8R2N1
AK160929 BAE36096 Q8R2N1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aqp3 NP_057898 R.norvegicus Aqp3 65133   NP_113891 97
H.sapiens AQP3 360 Gene Info NP_004916 96
S.cerevisiae YFL054C 850490   NP_116601 40
S.pombe SPAC977.17 2543301   NP_592788 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)