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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Ift52, intraflagellar transport 52
Sequence ID:NM_172150
Entrez Gene ID:245866
Ensembl ID:ENSMUSG00000017858

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H2|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 163017471 - 163046135

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4222723Full LengthBC037708intraflagellar transport 52 homolog (Chlamydomonas)

Protein Infomation

NM_172150 NP_742162 Q62559  

Related Sequences

BC037708 AAH37708 Q62559
AK088467 BAC40371 Q62559
AK144188 BAE25755 Q62559
AK160745 BAE35985 Q3TUI6
AK167194 BAE39324 Q62559

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Ift52 NP_742162 R.norvegicus Ift52 362265   XP_002729297 100
H.sapiens IFT52 51098 Gene Info NP_057088 92
A.gambiae AgaP_AGAP008725 1275575   XP_314836 45
C.elegans osm-6 179631   NP_741633 42
D.melanogaster osm-6 33917   NP_609045 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)