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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sgcd, Sarcoglycan, delta (dystrophin-associated glycoprotein)
Sequence ID:NM_011891
Entrez Gene ID:24052
Ensembl ID:ENSMUSG00000020354

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11|11 B1.2

Chromosomal Position (from UCSC)

Chromosomal Position:11: 46979260 - 47379522

NM_011891 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16544679228446792937
6557784679431246794435
7798514689628046896352
8529714693903646939155
97210594694609946946186
106011614700853247008633
116213504716868647168874
135113994719275547192803

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40140624Full LengthBC130019sarcoglycan, delta (dystrophin-associated glycoprotein)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036021  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011891 NP_036021 Q544D4
P82347
Sarcoglycan_1

Related Sequences

 
mRNAGenPeptSwissProt
BC130019 AAI30020 Q544D4
P82347
AB024923 BAA83494 Q544D4
P82347
AK040974 BAC30766 Q544D4
P82347
AK047384 BAC33042 Q8C8D9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sgcd NP_036021 R.norvegicus Sgcd 497892   NP_001128298 100
H.sapiens SGCD 6444 Gene Info NP_000328 94
A.gambiae AgaP_AGAP000073 1272201   XP_311082 42
D.melanogaster Scgdelta 31129   NP_001162640 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)