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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tlr3, toll-like receptor 3
Sequence ID:NM_126166
Entrez Gene ID:142980
Ensembl ID:ENSMUSG00000031639

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 B2

Chromosomal Position (from UCSC)

Chromosomal Position:8: 45396363 - 45408699

NM_126166 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
114774648101846482494
147833304648272346484575
333135224648599946486190
352339754648805146488503
397640454649401946494088
404642404649514946495343
424143274649580646495892

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30084049Full LengthBC099937toll-like receptor 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_569054  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_126166 NP_569054 Q99MB1 LRR_1
TIR

Related Sequences

 
mRNAGenPeptSwissProt
BC099937 AAH99937 Q499F3
AF355152 AAK26117 Q99MB1
AF420279 AAL27007 Q99MB1
AK083977 BAC39082 Q99MB1
AK087739 BAC39988 Q8C2X8
AK166177 BAE38611 Q3TM31

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tlr3 NP_569054 R.norvegicus Tlr3 364594   NP_942086 91
H.sapiens TLR3 7098 Gene Info NP_003256 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)