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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccdc88a, coiled coil domain containing 88A
Sequence ID:NM_176841
Entrez Gene ID:108686
Ensembl ID:ENSMUSG00000032740

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A3.3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 29374347 - 29507189

 Exon Info From UCSC:
NM_176841

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9094509IncompleteBC172933RIKEN cDNA A430106J12 gene
9094523IncompleteBC172947RIKEN cDNA A430106J12 gene
30542555IncompleteBC079895RIKEN cDNA A430106J12 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_176841 NP_789811 Q5SNZ0  

Related Sequences

 
mRNAGenPeptSwissProt
BC037020 AAH37020 Q5SNZ0
AK082771 BAC38612 Q5SNZ0
AK129310 BAC98120 Q6ZPV9
AB087827 BAD98263 Q5SNZ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccdc88a NP_789811 R.norvegicus Ccdc88a 305605   XP_223709 96
H.sapiens CCDC88A 55704 Gene Info NP_001129069 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)