Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Arfgap1, ADP-ribosylation factor GTPase activating protein 1
Sequence ID:NM_001177706
NM_001177707
NM_001177708
NM_001177709
NM_001177710
NM_145760
Entrez Gene ID:228998
Ensembl ID:ENSMUSG00000027575

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H4|2 104.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 180967270 - 180981397

 Exon Info From UCSC:
NM_001177706
NM_001177707
NM_001177708
NM_001177709
NM_001177710
NM_145760

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5717009Full LengthBC059817ADP-ribosylation factor GTPase activating protein 1
6312351Full LengthBC052922ADP-ribosylation factor GTPase activating protein 1
4487426IncompleteBC016228ADP-ribosylation factor GTPase activating protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_665703  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177706 NP_001171177    
NM_001177707 NP_001171178    
NM_001177708 NP_001171179    
NM_001177709 NP_001171180    
NM_001177710 NP_001171181    
NM_145760 NP_665703 Q9EPJ9 ArfGap

Related Sequences

 
mRNAGenPeptSwissProt
BC016228 AAH16228 Q05DE0
BC052922 AAH52922 Q05BC5
BC059817 AAH59817 Q6PB94
AK030295 BAC26883 Q9EPJ9
AK030520 BAC27002 Q9EPJ9
AK052985 BAC35231 Q8BWB5
AK134402 BAE22128 Q3TGS9
AK145879 BAE26720 Q9EPJ9
AK168007 BAE39994 Q9EPJ9
AK168602 BAE40469 Q3TGS9
AJ401461 CAC18721 Q9EPJ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arfgap1 NP_665703 R.norvegicus Arfgap1 246310   NP_659558 97
H.sapiens ARFGAP1 55738 Gene Info NP_060679 88
C.elegans K02B12.7 172643   NP_492310 54
A.gambiae AgaP_AGAP006462 1277073   XP_316505 50
D.melanogaster Gap69C 39417   NP_524040 43
A.thaliana AGD6 824538   NP_001030854 36
A.thaliana AGD7 818331   NP_001031503 35
S.cerevisiae GCS1 851372   NP_010055 34
N.crassa NCU07734 3878132   XP_961984 33
S.pombe SPCC622.14 2539181   NP_588186 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta