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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. C1ql2, complement component 1, q subcomponent-like 2
Sequence ID:NM_207233
Entrez Gene ID:226359
Ensembl ID:ENSMUSG00000036907

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E2.3|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 120340574 - 120343171

NM_207233 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1420122237158122237577
4211219122237579122238377
12201999122238971122239750

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4503096Full LengthBC040774complement component 1, q subcomponent-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997116  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_207233 NP_997116 Q8CFR0 C1q
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
BC040774 AAH40774 Q8CFR0
DQ002402 AAY21934 Q8CFR0
AK144471 BAE25906 Q8CFR0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C1ql2 NP_997116 R.norvegicus C1ql2 288979   NP_001099419 99
H.sapiens C1QL2 165257 Gene Info NP_872334 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)