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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2
Sequence ID:NM_001025581
Entrez Gene ID:268345
Ensembl ID:ENSMUSG00000035681

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D2|10 62.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 112456342 - 112467024

NM_001025581 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
145111708178111708222
46763111708742111709459
7641691111892663111893590
16921856111895545111895709
18576196111899020111903359

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40094886Full LengthBC116289potassium voltage gated channel, Shaw-related subfamily, member 2
40094891Full LengthBC116290potassium voltage gated channel, Shaw-related subfamily, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020752  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025581 NP_001020752   Ion_trans
K_tetra
Ion_trans_2

Related Sequences

 
mRNAGenPeptSwissProt
U52223 AAB09438 P70311
BC116289 AAI16290 Q14B80
BC116290 AAI16291 Q14B80

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kcnc2 NP_001020752 R.norvegicus Kcnc2 246153   NP_631963 99
H.sapiens KCNC2 3747 Gene Info NP_631875 98
D.melanogaster Shaw 33599   NP_001137782 55
A.gambiae AgaP_AGAP008200 1277771   XP_317268 54
C.elegans F14F11.1 174331   NP_001022089 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)