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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tlr13, toll-like receptor 13
Sequence ID:NM_205820
Entrez Gene ID:279572
Ensembl ID:ENSMUSG00000033777

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X D|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 106143294 - 106159702

NM_205820 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
147103338613103338659
48215103342784103342951
2164014103352033103355831

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40097310Full LengthBC117913toll-like receptor 13
40097311Full LengthBC117914toll-like receptor 13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_991389  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_205820 NP_991389 Q6R5N8 LRR_1
TIR

Related Sequences

 
mRNAGenPeptSwissProt
BC117913 AAI17914 Q6R5N8
BC117914 AAI17915 Q6R5N8
AY510706 AAS37674 Q6R5N8
AK170044 BAE41528 Q6R5N8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tlr13 NP_991389 R.norvegicus RGD1562655 317227   XP_002730306 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)