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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Kcnd1, Potassium voltage-gated channel, Shal-related family, member 1
Sequence ID:NM_008423
Entrez Gene ID:16506
Ensembl ID:ENSMUSG00000009731

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X A1.1|X 2.2

Chromosomal Position (from UCSC)

Chromosomal Position:X: 7836789 - 7837697

NM_008423 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1112174009687402088
1122128474082977408459
1285136874085577408640
1369146774087277408825
1468171874092187409468
1719195674133917413628

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862347Full LengthBC139325potassium voltage-gated channel, Shal-related family, member 1
8862349Full LengthBC139327potassium voltage-gated channel, Shal-related family, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032449  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008423 NP_032449 Q03719 Ion_trans
K_tetra

Related Sequences

 
mRNAGenPeptSwissProt
M64226 AAA39745 Q03719
BC139325 AAI39326 A2AEX0
BC139327 AAI39328 A2AEX0
AK033805 BAC28480 Q03719
AK004144 BAE43162 Q3V4C3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kcnd1 NP_032449 R.norvegicus Kcnd1 116695   NP_001099218 98
H.sapiens KCND1 3750 Gene Info NP_004970 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)