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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Crlf1, cytokine receptor-like factor 1
Sequence ID:NM_018827
Entrez Gene ID:12931
Ensembl ID:ENSMUSG00000007888

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C1|8 0.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 70493157 - 70504081

NM_018827 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12457301705473017298
2465277302249573022776
5286577302299173023120
6588277302322873023397
8289857302478273024939
98611547302500873025176
115513427302720373027390
134313857302749573027537
138616467302771973027979

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063851Full LengthBC160203cytokine receptor-like factor 1
40056679IncompleteBC107376cytokine receptor-like factor 1
40056680IncompleteBC114407cytokine receptor-like factor 1
40056681IncompleteBC107377cytokine receptor-like factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061297  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018827 NP_061297 Q9JM58 fn3

Related Sequences

 
mRNAGenPeptSwissProt
BC107376 AAI07377 Q3B7Y3
BC107377 AAI07378 Q3B7Y2
BC160203 AAI60203  
AB040038 BAA92777 Q9JM58
AK019030 BAB31516 Q9D2R5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Crlf1 NP_061297 R.norvegicus Crlf1 290655   NP_001099544 99
H.sapiens CRLF1 9244 Gene Info NP_004741 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)