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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Itga9, integrin alpha 9
Sequence ID:NM_001113514
NM_133721
Entrez Gene ID:104099
Ensembl ID:ENSMUSG00000039115

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F3|9 67.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 118606708 - 118898939

 Exon Info From UCSC:
NM_001113514
NM_133721

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9087735Full LengthBC150824integrin alpha 9
5371378IncompleteBC049939integrin alpha 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598482  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113514 NP_001106986    
NM_133721 NP_598482 Q91YD5 Integrin_alpha
FG-GAP
Integrin_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
BC049939 AAH49939 Q80V97
BC150824 AAI50825 B9EKC4
AK083987 BAC39086 Q8BJG9
AK139690 BAE24106 Q3UT74
AJ344342 CAC69080 Q91YD5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itga9 NP_598482 R.norvegicus Itga9 685004   XP_001061864 96
H.sapiens ITGA9 3680 Gene Info NP_002198 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)