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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hcrtr2, hypocretin (orexin) receptor 2
Sequence ID:NM_198962
Entrez Gene ID:387285
Ensembl ID:ENSMUSG00000032360

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 D|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 76236217 - 76259756

NM_198962 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
123267607368676076011
232725497607831076078532
255026717608070676080827
267228927608397576084195
289330087609415376094268
300932527610226776102510
325334317610745876107636
343237287617108876171384

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055569Full LengthBC140957hypocretin (orexin) receptor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_945200  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_198962 NP_945200 P58308 7tm_1
Orexin_rec2

Related Sequences

 
mRNAGenPeptSwissProt
BC140957 AAI40958 B2RU43
AF394597 AAK71327 P58308
AY336084 AAR01327 P58308
AY336085 AAR01328 P58308
AK038551 BAC30039 P58308
AK041766 BAC31058 Q8BY65
AK048781 BAC33457 P58308
AK079572 BAC37688 Q8BV78

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hcrtr2 NP_945200 R.norvegicus Hcrtr2 25605   NP_037206 98
H.sapiens HCRTR2 3062 Gene Info NP_001517 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)