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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ppib, Peptidylprolyl isomerase B
Sequence ID:NM_011149
Entrez Gene ID:19035
Ensembl ID:ENSMUSG00000032383

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 C|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 66060222 - 66066621

NM_011149 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12326590797565908206
2333466590927365909386
3474406591079565910888
4416256591329365913477
6269606591410165914435

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3483267Full LengthBC013061peptidylprolyl isomerase B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035279  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011149 NP_035279 P24369
Q9DCY1
EC 5.2.1.8 Pro_isomerase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M60456 AAA37498 P24369 EC 5.2.1.8
BC013061 AAH13061 P24369
Q9DCY1
EC 5.2.1.8
AK002357 BAB22036 Q9DCY1  
AK128977 BAC87663 Q6ZQM2  
AK154073 BAE32357 Q9DCY1  
X58990 CAA41736 P24369 EC 5.2.1.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ppib NP_035279 R.norvegicus Ppib 64367   NP_071981 98
H.sapiens PPIB 5479 Gene Info NP_000933 94
A.gambiae AgaP_AGAP007088 1270014   XP_308669 74
S.pombe cyp4 2541395   NP_596532 70
C.elegans cyn-6 175231   NP_497257 70
C.elegans cyn-5 173374   NP_493624 69
A.thaliana CYP5 817546   NP_180557 69
D.melanogaster CG2852 37591   NP_611695 68
N.crassa NCU01200 5847555   XP_001728305 68
A.thaliana ROC7 835985   NP_200679 67
S.cerevisiae CPR5 851898   NP_010590 62
P.falciparum CyP22 810711   XP_001347835 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)