Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pvrl1, poliovirus receptor-related 1
Sequence ID:NM_021424
Entrez Gene ID:58235
Ensembl ID:ENSMUSG00000032012

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 B

Chromosomal Position (from UCSC)

Chromosomal Position:9: 43744643 - 43804015

NM_021424 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11474355265843552804
1484984359911943599469
4998014359995943600261
8029194360053043600647
92010714360217243602323
107250614361155443615543

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6405088Full LengthBC060694poliovirus receptor-related 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067399  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021424 NP_067399 Q9JKF6 ig
V-set
C2-set_2

Related Sequences

 
mRNAGenPeptSwissProt
AF239762 AAF60333 Q9JKF6
AF270977 AAF76195 Q9JKF6
AF297665 AAG22808 Q9JKF6
BC060694 AAH60694 Q9JKF6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pvrl1 NP_067399 R.norvegicus Pvrl1 192183   XP_236210 99
H.sapiens PVRL1 5818 Gene Info NP_002846 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta