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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Irf8, interferon regulatory factor 8
Sequence ID:NM_008320
Entrez Gene ID:15900
Ensembl ID:ENSMUSG00000041515

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8 65.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 120736357 - 120756688

NM_008320 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
134123260275123260308
35209123263716123263890
210393123267605123267788
394482123269519123269607
483588123271102123271207
589636123272198123272245
6371017123277252123277632
10181133123278287123278402
11342827123278898123280591

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3487214Full LengthBC005450interferon regulatory factor 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032346  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008320 NP_032346 Q544J7
P23611
IRF

Related Sequences

 
mRNAGenPeptSwissProt
M32489 AAA37878 Q544J7
P23611
BC005450 AAH05450 Q544J7
P23611
AK018533 BAB31258 Q544J7
P23611
AK036488 BAC29448 Q544J7
P23611
AK137450 BAE23355 Q544J7
P23611
AK146004 BAE26825 Q544J7
P23611
AK150320 BAE29465 Q544J7
P23611
AK150370 BAE29503 Q3UCV9
AK151324 BAE30305 Q544J7
P23611
AK152477 BAE31251 Q3U6F0
AK152906 BAE31586 Q544J7
P23611
AK153068 BAE31694 Q544J7
P23611
AK153166 BAE31775 Q3U6F0
AK153395 BAE31957 Q544J7
P23611
AK154662 BAE32750 Q544J7
P23611
AK156481 BAE33727 Q3U0X4
AK157147 BAE33980 Q3U075
AK157170 BAE33987 Q3U068
AK157249 BAE34013 Q544J7
P23611
AK157700 BAE34155 Q3TZQ3
AK159835 BAE35413 Q544J7
P23611
CT010225 CAJ18433 Q544J7
P23611

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Irf8 NP_032346 R.norvegicus Irf8 292060   NP_001008722 95
H.sapiens IRF8 3394 Gene Info NP_002154 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)