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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdh13, cadherin 13
Sequence ID:NM_019707
Entrez Gene ID:12554
Ensembl ID:ENSMUSG00000031841

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8 64.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 118283744 - 119323454

 Exon Info From UCSC:
NM_019707

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3987627Full LengthBC021628cadherin 13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062681  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019707 NP_062681 Q9WTR5 Cadherin

Related Sequences

 
mRNAGenPeptSwissProt
BC021628 AAH21628 Q8VDK4
AB022100 BAA76677 Q9WTR5
AK028002 BAC25696 Q8BT28
AK029195 BAC26343 Q8CE18
AK034995 BAC28906 Q8BS79
AK039438 BAC30347 Q9WTR5
AK048724 BAC33435 Q9WTR5
AK134649 BAE22225 Q9WTR5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdh13 NP_062681 R.norvegicus Cdh13 192248   NP_620244 98
H.sapiens CDH13 1012 Gene Info NP_001207417 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)