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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Clca3, chloride channel calcium activated 3
Sequence ID:NM_017474
Entrez Gene ID:23844
Ensembl ID:ENSMUSG00000028255

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 H2|3 74.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 145004537 - 145032759

 Exon Info From UCSC:
NM_017474

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4217548Full LengthBC028343chloride channel calcium activated 3
40095991Full LengthBC116318chloride channel calcium activated 3
40095992Full LengthBC116319chloride channel calcium activated 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059502  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017474 NP_059502 Q9D7Z6 VWA
CLCA_N

Related Sequences

 
mRNAGenPeptSwissProt
BC028343 AAH28343 Q9D7Z6
BC116318 AAI16319 Q9D7Z6
BC116319 AAI16320 Q9D7Z6
AB017156 BAA33743 Q9D7Z6
AK008659 BAB25815 Q9D7Z6
AK136476 BAE22995 Q9D7Z6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clca3 NP_059502 R.norvegicus Clca1 308015   NP_001100919 90
H.sapiens CLCA1 1179 Gene Info NP_001276 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)