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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Exosc6, exosome component 6
Sequence ID:NM_028274
Entrez Gene ID:72544

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 111056338 - 111057664

NM_028274 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11261113580238113581498

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733831Full LengthBC119082exosome component 6
40126304Full LengthBC116985exosome component 6
1383406IncompleteBC038643exosome component 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082550  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028274 NP_082550 Q8BTW3 RNase_PH

Related Sequences

 
mRNAGenPeptSwissProt
BC116985 AAI16986 Q8BTW3
BC119082 AAI19083 Q8BTW3
AK012102 BAB28033 Q8BTW3
AK088532 BAC40407 Q8BTW3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Exosc6 NP_082550 R.norvegicus Exosc6 307850   XP_226471 98
H.sapiens EXOSC6 118460 Gene Info NP_478126 92
A.gambiae AgaP_AGAP011906 3291448   XP_552338 39
D.melanogaster Mtr3 40173   NP_649157 38
A.thaliana AT4G27490 828858   NP_194479 33
S.pombe SPBC211.08c 2540412   NP_596618 33
N.crassa NCU08026 3878862   XP_962696 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)