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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cacna1a, calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
Sequence ID:NM_001252059
NM_001252060
NM_001252061
NM_007578
Entrez Gene ID:12286
Ensembl ID:ENSMUSG00000034656

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C3|8 38.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 84415590 - 84639933


Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031604  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252059 NP_001238988    
NM_001252060 NP_001238989    
NM_001252061 NP_001238990    
NM_007578 NP_031604 Q3UHN4
P97445
Ion_trans

Related Sequences

 
mRNAGenPeptSwissProt
U76716 AAC52940 P97445
AY714490 AAW56205 P97445
AB066608 BAB85611 Q8R5M7
AB066609 BAB85612 Q8R5M6
AK052625 BAC35067 Q8C734
AK147277 BAE27814 Q3UHA5
AK147288 BAE27823 Q3UHN4
AK147498 BAE27952 Q3UHA5
AK147697 BAE28080 Q3UHA5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cacna1a NP_031604 R.norvegicus Cacna1a 25398   NP_037050 99
H.sapiens CACNA1A 773 Gene Info NP_075461 93
D.melanogaster cac 32158   NP_001014732 64
A.gambiae AgaP_AGAP002578 1273390   XP_312358 60
C.elegans unc-2 180570   NP_001123176 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)