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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd97, CD97 antigen
Sequence ID:NM_001163029
NM_001163030
NM_001163031
NM_011925
Entrez Gene ID:26364
Ensembl ID:ENSMUSG00000002885

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C2|8 38.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 83723367 - 83741169

 Exon Info From UCSC:
NM_001163029
NM_001163030
NM_001163031
NM_011925

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3499451Full LengthBC006676CD97 antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036055  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163029 NP_001156501    
NM_001163030 NP_001156502    
NM_001163031 NP_001156503    
NM_011925 NP_036055   7tm_2
EGF
GPS
EGF_CA

Related Sequences

 
mRNAGenPeptSwissProt
AF146344 AAF67800 Q9Z0M6
BC006676 AAH06676 Q9Z0M6
AK004577 BAB23386 Q9DC42
AK008101 BAB25461 Q9Z0M6
Y18365 CAB38246 Q9Z0M6
CT010326 CAJ18534 Q4FJS6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd97 NP_001156502 R.norvegicus Cd97 361383   NP_001012164 85
H.sapiens CD97 976 Gene Info NP_510966 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)