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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Swap70, SWA-70 protein
Sequence ID:NM_009302
Entrez Gene ID:20947
Ensembl ID:ENSMUSG00000031015

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F1|7 50.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 110221810 - 110281337

 Exon Info From UCSC:
NM_009302

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30546814Full LengthBC065136SWA-70 protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033328  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009302 NP_033328 Q6A028 PH

Related Sequences

 
mRNAGenPeptSwissProt
AF053974 AAC40155 Q6A028
BC065136 AAH65136 Q6A028
AK172990 BAD32268 Q6A028
AK146773 BAE27422 Q6A028
AK150621 BAE29711 Q6A028
AK163357 BAE37316 Q6A028

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Swap70 NP_033328 R.norvegicus Swap70 293410   NP_001099758 98
H.sapiens SWAP70 23075 Gene Info NP_055870 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)