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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdh17, cadherin 17
Sequence ID:NM_019753
Entrez Gene ID:12557
Ensembl ID:ENSMUSG00000028217

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4|4 A2

Chromosomal Position (from UCSC)

Chromosomal Position:4: 11758260 - 11817874

 Exon Info From UCSC:
NM_019753

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4208360Full LengthBC042891cadherin 17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062727  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019753 NP_062727 Q9R100 Cadherin

Related Sequences

 
mRNAGenPeptSwissProt
AF177669 AAD51125 Q9R100
BC042891 AAH42891 Q9R100
D87912 BAB03264 Q9R100
AK155633 BAE33356 Q3U1Y7
AK171733 BAE42638 Q3TAN0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdh17 NP_062727 R.norvegicus Cdh17 117048   NP_446429 91
H.sapiens CDH17 1015 Gene Info NP_001138135 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)