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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rgma, RGM domain family, member A
Sequence ID:NM_177740
Entrez Gene ID:244058
Ensembl ID:ENSMUSG00000070509

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 D1|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 73391257 - 73419899

NM_177740 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13698052040580520773
3704858053626680536381
48610038055411780554634
100435868056220280564784

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5353958Full LengthBC023870RGM domain family, member A
6826181Full LengthBC059072RGM domain family, member A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_808408  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177740 NP_808408 Q6PCX7
Q8C4C4
RGM_C
RGM_N

Related Sequences

 
mRNAGenPeptSwissProt
BC023870 AAH23870 Q6PCX7
BC059072 AAH59072 Q6PCX7
AK082560 BAC38530 Q8C4C4
AJ557513 CAD89718 Q6PCX7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rgma NP_808408 R.norvegicus Rgma 308739   NP_001100994 98
H.sapiens RGMA 56963 Gene Info NP_001159755 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)