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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chsy1, chondroitin sulfate synthase 1
Sequence ID:NM_001081163
Entrez Gene ID:269941
Ensembl ID:ENSMUSG00000032640

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 C|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 66109514 - 66173788

NM_001081163 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17137325440073255112
71412097327012773270622
121041767331571773318683

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40061623IncompleteBC153826chondroitin sulfate synthase 1
40097404IncompleteBC128567chondroitin sulfate synthase 1
40097411IncompleteBC153827chondroitin sulfate synthase 1

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001081163 NP_001074632 Q6ZQ11 EC 2.4.1.226
EC 2.4.1.175
 

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC128567 AAI28568 A2VCT7  
BC153826 AAI53827 A8E635  
BC153827 AAI53828 A8E636  
AK129255 BAC98065 Q6ZQ11 EC 2.4.1.226
EC 2.4.1.175

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chsy1 NP_001074632 R.norvegicus Chsy1 292999   NP_001099738 98
H.sapiens CHSY1 22856 Gene Info NP_055733 95
A.gambiae AgaP_AGAP001010 1270501   XP_309203 48
D.melanogaster CG9220 32497   NP_996440 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)