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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Plekhf1, pleckstrin homology domain containing, family F (with FYVE domain) member 1
Sequence ID:NM_024413
Entrez Gene ID:72287
Ensembl ID:ENSMUSG00000074170

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 B1

Chromosomal Position (from UCSC)

Chromosomal Position:7: 38220678 - 38221620

NM_024413 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
115053900567239007176
150615593901295939013012

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3491671Full LengthBC002120pleckstrin homology domain containing, family F (with FYVE domain) member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077724  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024413 NP_077724 Q3TB82 PH
FYVE

Related Sequences

 
mRNAGenPeptSwissProt
BC002120 AAH02120 Q3TB82
AK007489 BAC25174 Q8CF15
AK143976 BAE25641 Q3TB82
AK157990 BAE34303 Q3TB82
AK170283 BAE41685 Q3TB82
AK171398 BAE42432 Q3TB82

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Plekhf1 NP_077724 R.norvegicus Plekhf1 308543   NP_001013166 96
H.sapiens PLEKHF1 79156 Gene Info NP_077286 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)