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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Selp, selectin, platelet
Sequence ID:NM_011347
Entrez Gene ID:20344
Ensembl ID:ENSMUSG00000026580

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H2.2|1 86.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 164141874 - 164149141

 Exon Info From UCSC:
NM_011347

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047544Full LengthBC109158selectin, platelet
40047547Full LengthBC109159selectin, platelet

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035477  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011347 NP_035477 Q01102 EGF
Lectin_C
Sushi

Related Sequences

 
mRNAGenPeptSwissProt
M72332 AAA37712 Q01102
M87861 AAA40008 Q01102
BC109158 AAI09159 Q01102
BC109159 AAI09160 Q01102
AK136243 BAE22893 Q3UWM1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Selp NP_035477 R.norvegicus Selp 25651   NP_037246 89
H.sapiens SELP 6403 Gene Info NP_002996 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta