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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Nlrp5, NLR family, pyrin domain containing 5
Sequence ID:NM_001039143
NM_011860
Entrez Gene ID:23968
Ensembl ID:ENSMUSG00000015721

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A2|7 2.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 23404101 - 23441916

 Exon Info From UCSC:
NM_001039143
NM_011860

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30049556Full LengthBC053384NLR family, pyrin domain containing 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035990  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039143 NP_001034232    
NM_011860 NP_035990 Q9R1M5 LRR_1
NACHT

Related Sequences

 
mRNAGenPeptSwissProt
AF074018 AAD51762 Q9R1M5
BC053384 AAH53384 Q9R1M5
AY196361 AAO52697 Q9R1M5
AY196362 AAO52698 Q9R1M5
AY329484 AAQ94607 Q9R1M5
AY329485 AAQ94608 Q9R1M5
AY329486 AAQ94609 Q9R1M5
AY329487 AAQ94610 Q9R1M5
AY329488 AAQ94611 Q9R1M5
AY329489 AAQ94612 Q9R1M5
AY329490 AAQ94613 Q9R1M5
AY329491 AAQ94614 Q9R1M5
AK135731 BAE22633 Q9R1M5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nlrp5 NP_035990 R.norvegicus Nlrp5 308325   NP_001100944 72
H.sapiens NLRP5 126206 Gene Info NP_703148 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)