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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ift122, intraflagellar transport 122
Sequence ID:NM_001167763
NM_031177
Entrez Gene ID:81896
Ensembl ID:ENSMUSG00000030323

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 115923384 - 115926695

 Exon Info From UCSC:
NM_001167763
NM_031177

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30063124Full LengthBC067415intraflagellar transport 122 homolog (Chlamydomonas)
30355922Full LengthBC066083intraflagellar transport 122 homolog (Chlamydomonas)
6822235IncompleteBC060621intraflagellar transport 122 homolog (Chlamydomonas)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112454  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001167763 NP_001161235 Q6NWV3  
NM_031177 NP_112454   WD40

Related Sequences

 
mRNAGenPeptSwissProt
AF296075 AAG15251 Q9ERM4
BC066083 AAH66083 Q6NWV3
BC067415 AAH67415 Q6NWV3
AK031308 BAC27340 Q6NWV3
AK044456 BAC31930 Q6NWV3
AK077104 BAC36613 Q8C5U2
AK131115 BAD21365 Q6NWV3
AK167330 BAE39432 Q6NWV3
AK167412 BAE39501 Q6NWV3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ift122 NP_112454 R.norvegicus Ift122 312651   XP_001057925 99
H.sapiens IFT122 55764 Gene Info NP_443715 91
A.gambiae AgaP_AGAP006535 1277134   XP_316573 50
D.melanogaster Oseg1 38957   NP_648221 48
C.elegans daf-10 184883   NP_501591 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)