Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Apobec1, apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
Sequence ID:NM_031159
NM_001134391
Entrez Gene ID:11810
Ensembl ID:ENSMUSG00000040613

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F1|6 54.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 122577798 - 122602320

 Exon Info From UCSC:
NM_031159
NM_001134391

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3494195Full LengthBC003792apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112436  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134391 NP_001127863    
NM_031159 NP_112436 Q3U9G8
P51908
APOBEC_C
APOBEC_N

Related Sequences

 
mRNAGenPeptSwissProt
U22262 AAC52212 Q3U9G8
P51908
U22263 AAC52213 Q3U9G8
P51908
U22264 AAC52214 Q3U9G8
P51908
BC003792 AAH03792 Q3TLN2
P51908
AK146427 BAE27161 Q3U9G8
P51908
AK151799 BAE30699 Q3U9G8
P51908
AK165209 BAE38079 Q3U9G8
P51908
AK166412 BAE38760 Q3TLN2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Apobec1 NP_112436 R.norvegicus Apobec1 25383   NP_037039 92
H.sapiens APOBEC1 339 Gene Info NP_001635 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)