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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mitf, microphthalmia-associated transcription factor
Sequence ID:NM_001113198
NM_001178049
NM_008601
Entrez Gene ID:17342
Ensembl ID:ENSMUSG00000035158

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D3|6 40.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 97807062 - 97807287

 Exon Info From UCSC:
NM_001113198
NM_001178049
NM_008601

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047440Full LengthBC108976microphthalmia-associated transcription factor
40047441Full LengthBC108977microphthalmia-associated transcription factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032627  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113198 NP_001106669    
NM_001178049 NP_001171520    
NM_008601 NP_032627 Q32MU7 HLH

Related Sequences

 
mRNAGenPeptSwissProt
L22958 AAB47773 Q08874
U19874 AAC52155 Q08874
U19875 AAC52156 Q08874
BC108976 AAI08977 Q32MU7
BC108977 AAI08978 I6L9I6
AY632571 AAV34581 Q5C9J1
AY632573 AAV34582 Q5C9J0
AB009397 BAA32329 Q08874
AK052895 BAC35192 Q8C6Y4
AK155350 BAE33209 Q3U2D2
Z23066 CAA80600 Q32MU7
Q08874

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mitf NP_001106669 R.norvegicus Mitf 25094   XP_001065759 99
H.sapiens MITF 4286 Gene Info NP_937802 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta