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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Eefsec, eukaryotic elongation factor, selenocysteine-tRNA-specific
Sequence ID:NM_023060
Entrez Gene ID:65967
Ensembl ID:ENSMUSG00000033216

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 D2

Chromosomal Position (from UCSC)

Chromosomal Position:6: 88257869 - 88446495

NM_023060 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110588820732788208384
105912158823154288231698
121618758824757088248229
187620408830547688305640
204121378830853988308635
213823458832619788326404
234626798839619988396532

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3158026Full LengthBC024915eukaryotic elongation factor, selenocysteine-tRNA-specific
5011896Full LengthBC099675eukaryotic elongation factor, selenocysteine-tRNA-specific

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075547  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023060 NP_075547 Q9JHW4 GTP_EFTU
GTP_EFTU_D2

Related Sequences

 
mRNAGenPeptSwissProt
AF283518 AAF91471 Q9JHW4
AF268871 AAG13374 Q9JHW4
BC024915 AAH24915 Q9JHW4
BC099675 AAH99675 Q499X6
AK028424 BAC25942 Q9JHW4
AK087501 BAC39900 Q8BN64
AK147924 BAE28232 Q3UGH6
AK171885 BAE42718 Q3TAF0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Eefsec NP_075547 H.sapiens EEFSEC 60678 Gene Info NP_068756 90
A.gambiae AgaP_AGAP006250 1276909   XP_316316 50
D.melanogaster EfSec 37444   NP_611584 49
C.elegans selb-1 173172   NP_493275 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)