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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lrrk1, leucine-rich repeat kinase 1
Sequence ID:NM_146191
Entrez Gene ID:233328
Ensembl ID:ENSMUSG00000015133

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 C|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 66341499 - 66343265

 Exon Info From UCSC:
NM_146191

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30543489Full LengthBC072664leucine-rich repeat kinase 1
30143856IncompleteBC080819leucine-rich repeat kinase 1
30472176IncompleteBC066159leucine-rich repeat kinase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666303  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_146191 NP_666303 Q3UHC2 EC 2.7.11.1 Ank
Pkinase
LRR_1
Miro

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC027199 AAH27199 Q3UHC2 EC 2.7.11.1
BC066159 AAH66159 Q3UHC2 EC 2.7.11.1
BC072664 AAH72664 Q3UHC2 EC 2.7.11.1
BC080819 AAH80819 Q3UHC2 EC 2.7.11.1
AK051264 BAC34581 Q3UHC2 EC 2.7.11.1
AK076432 BAC36341 Q3UHC2 EC 2.7.11.1
AK081849 BAC38349 Q3UHC2 EC 2.7.11.1
AK086795 BAC39743 Q3UHC2 EC 2.7.11.1
AK129441 BAC98251 Q3UHC2 EC 2.7.11.1
AK147469 BAE27935 Q3UHC2 EC 2.7.11.1
AK154395 BAE32558 Q3UHC2 EC 2.7.11.1
AK171849 BAE42696 Q3TAH2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrrk1 NP_666303 R.norvegicus Lrrk1 308703   XP_218760 96
H.sapiens LRRK1 79705 Gene Info NP_078928 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)