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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gjc3, gap junction protein, gamma 3
Sequence ID:NM_080450
Entrez Gene ID:118446
Ensembl ID:ENSMUSG00000056966

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 137955432 - 137962923

NM_080450 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12636138395036138397671
26373421138398432138399216
34223515138404093138404186

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129820Full LengthBC125305gap junction membrane channel protein epsilon 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_536698  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080450 NP_536698 Q921C1 Connexin

Related Sequences

 
mRNAGenPeptSwissProt
BC125305 AAI25306 Q921C1
AY289210 AAP41202 Q921C1
AY293564 AAP50246 Q921C1
AY297108 AAP51160 Q921C1
AK034037 BAC28554 Q921C1
AK045577 BAC32421 Q921C1
AK047368 BAC33038 Q921C1
AK147913 BAE28224 Q921C1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gjc3 NP_536698 R.norvegicus Gjc3 288529   XP_221997 87
H.sapiens GJC3 349149 Gene Info NP_853516 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)