Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hnf1a, HNF1 homeobox A
Sequence ID:NM_009327
Entrez Gene ID:21405
Ensembl ID:ENSMUSG00000029556

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 65.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 114948980 - 114970868

NM_009327 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
181223115398988115400193
12241368115400702115400846
13691487115400934115401052
14881679115402587115402778
16801881115403335115403536
18822030115403647115403795
20312272115405258115405499
22732459115405824115406010
24602659115410024115410223
26603203115420527115421070

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30471380Full LengthBC080698HNF1 homeobox A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033353  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009327 NP_033353 P22361 HNF-1B_C
HNF-1A_C
HNF-1_N

Related Sequences

 
mRNAGenPeptSwissProt
M57966 AAA37821 P22361
BC080698 AAH80698 Q66JY7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hnf1a NP_033353 R.norvegicus Hnf1a 24817   NP_036801 99
H.sapiens HNF1A 6927 Gene Info NP_000536 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta