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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pf4, platelet factor 4
Sequence ID:NM_019932
Entrez Gene ID:56744
Ensembl ID:ENSMUSG00000029373

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E1|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 90772512 - 90773383

NM_019932 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12449120146091201703
2453779120193791202069
3785889120219891202408

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30280161Full LengthBC061111platelet factor 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064316  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019932 NP_064316 Q3TVN6
Q9Z126
IL8

Related Sequences

 
mRNAGenPeptSwissProt
BC061111 AAH61111 Q6P8R3
AB017491 BAA75660 Q3TVN6
Q9Z126
AK159278 BAE34956 Q3TVN6
Q9Z126
AK160040 BAE35582 Q3TVN6
Q9Z126

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pf4 NP_064316 R.norvegicus Pf4 360918   NP_001007730 89
H.sapiens PF4 5196 Gene Info NP_002610 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)