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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Corin, corin
Sequence ID:NM_001122756
NM_016869
Entrez Gene ID:53419
Ensembl ID:ENSMUSG00000005220

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 C3.2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 72300025 - 72504208

 Exon Info From UCSC:
NM_001122756
NM_016869

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861359Full LengthBC138339corin
8861360Full LengthBC138340corin
9053795Full LengthBC145243corin
30648458Full LengthBC093485corin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058565  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001122756 NP_001116228    
NM_016869 NP_058565 Q9Z319 Ldl_recept_a
Trypsin
Fz

Related Sequences

 
mRNAGenPeptSwissProt
BC093485 AAH93485 Q9Z319
BC138339 AAI38340 Q9Z319
BC138340 AAI38341 Q9Z319
BC145243 AAI45244 B7ZNH6
AB013874 BAA34371 Q9Z319

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Corin NP_058565 R.norvegicus Corin 289596   NP_872279 93
H.sapiens CORIN 10699 Gene Info NP_006578 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta