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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Whsc2, Wolf-Hirschhorn syndrome candidate 2 (human)
Sequence ID:NM_011914
Entrez Gene ID:24116
Ensembl ID:ENSMUSG00000029111

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, eye, fetus, gastrointestinal tract, heart, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 33898179 - 33936216

 Exon Info From UCSC:
NM_011914

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4912719Full LengthBC038003Wolf-Hirschhorn syndrome candidate 2 (human)
3588210IncompleteBC018423Wolf-Hirschhorn syndrome candidate 2 (human)

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001081102 NP_001074571      
NM_001177884 NP_001171355      
NM_011914 NP_036044 Q8BG30    
NM_175231 NP_780440 Q8BVE8 EC 2.1.1.43  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF101435 AAC72983 Q8BG30  
BC018423 AAH18423 Q8BG30  
BC038003 AAH38003 Q8BG30  
BC046473 AAH46473 Q8BVE8 EC 2.1.1.43
BC053454 AAH53454 Q8BVE8 EC 2.1.1.43
BC156160 AAI56161    
BC156967 AAI56968    
BC158094 AAI58095 B2RY48  
AK012673 BAB28399 Q8BG30  
AK017992 BAC25538 Q8C1I1  
AK078622 BAC37342 Q8BVE8 EC 2.1.1.43
AK078760 BAC37379 Q8BG30  
AK079112 BAC37544 Q8BJU7  
AK088384 BAC40319 Q8BG30  
AK129287 BAC98097 Q8BVE8 EC 2.1.1.43
AK146185 BAE26961 Q3UK41  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Whsc2 NP_036044 R.norvegicus Whsc2 305455   NP_001008340 99
H.sapiens WHSC2 7469 Gene Info NP_005654 96
A.gambiae AgaP_AGAP002290 5667720   XP_001687824 44
D.melanogaster NELF-A 42520   NP_650958 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)