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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Atg9b, autophagy related 9B
Sequence ID:NM_001002897
Entrez Gene ID:213948
Ensembl ID:ENSMUSG00000038295

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A3|5 9.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 24384366 - 24385456

 Exon Info From UCSC:
NM_001002897

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063494Full LengthBC157130ATG9 autophagy related 9 homolog B (S. cerevisiae)
100061888BC156363ATG9 autophagy related 9 homolog B (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001002897  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002897 NP_001002897 Q6EBV9 APG9

Related Sequences

 
mRNAGenPeptSwissProt
BC156363 AAI56364 Q6EBV9
BC157130 AAI57131  
AY495541 AAS72555 Q6EBV9
AY515312 AAS87213 Q6EBV9
AY515313 AAS87214 Q6EBV9
BK004021 DAA05202 Q6EBV9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atg9b NP_001002897 R.norvegicus Atg9b 499973   XP_575327 96
H.sapiens ATG9B 285973 Gene Info NP_775952 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)