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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lima1, LIM domain and actin binding 1
Sequence ID:NM_001113545
NM_023063
Entrez Gene ID:65970
Ensembl ID:ENSMUSG00000023022

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F1|15 60.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 99778507 - 99820072

 Exon Info From UCSC:
NM_001113545
NM_023063

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3498138Full LengthBC031490LIM domain and actin binding 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075550  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113545 NP_001107017 Q9ERG0  
NM_023063 NP_075550   LIM

Related Sequences

 
mRNAGenPeptSwissProt
AF307844 AAG31147 Q9ERG0
AF307845 AAG31148 Q9ERG0
BC031490 AAH31490 Q9ERG0
AK028186 BAC25798 Q8BT15
AK031698 BAC27520 Q8CD09
AK049350 BAC33699 Q8C7S2
AK085065 BAC39353 Q8C3R7
AK132314 BAE21099 Q8CD09
AK167220 BAE39345 Q8CD09

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lima1 NP_001107017 R.norvegicus Lima1 300228   XP_217039 90
H.sapiens LIMA1 51474 Gene Info NP_001107018 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)