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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pigk, phosphatidylinositol glycan anchor biosynthesis, class K
Sequence ID:NM_025662
NM_178016
Entrez Gene ID:329777
Ensembl ID:ENSMUSG00000039047

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 H4

Chromosomal Position (from UCSC)

Chromosomal Position:3: 152714105 - 152785850

 Exon Info From UCSC:
NM_025662
NM_178016

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6827521Full LengthBC060175phosphatidylinositol glycan anchor biosynthesis, class K
3673601IncompleteBC023256phosphatidylinositol glycan anchor biosynthesis, class K

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079938  NP_821135  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025662 NP_079938 Q9CXY9 Peptidase_C13
NM_178016 NP_821135 Q8BL63 Peptidase_C13

Related Sequences

 
mRNAGenPeptSwissProt
BC047203 AAH47203 Q80V43
BC060175 AAH60175 Q9CXY9
AK013853 BAB29018 Q9CXY9
AK043033 BAC31442 Q8BXX3
AK046246 BAC32653 Q8BL63
AK077893 BAC37051 Q9CXY9
AK082806 BAC38629 Q9CXY9
AK160801 BAE36022 Q3TUE9
AK168666 BAE40518 Q3TGN0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pigk NP_079938 R.norvegicus Pigk 295543   NP_001011953 96
H.sapiens PIGK 10026 Gene Info NP_005473 91
A.gambiae AgaP_AGAP004301 1274450   XP_313575 71
D.melanogaster CG4406 31163   NP_569968 67
A.thaliana AT1G08750 837397   NP_563825 61
S.cerevisiae GPI8 851931   NP_010618 61
N.crassa NCU07259 3878279   XP_962113 60
S.pombe gpi8 2539272   NP_588198 58
C.elegans T05E11.6 188131   NP_502076 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)