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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clca5, chloride channel calcium activated 5
Sequence ID:NM_178697
Entrez Gene ID:229933
Ensembl ID:ENSMUSG00000036960

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 H2|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 145070264 - 145099041

 Exon Info From UCSC:
NM_178697

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5317084Full LengthBC096379chloride channel calcium activated 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848812  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178697 NP_848812 Q8BG22 CLCA_N

Related Sequences

 
mRNAGenPeptSwissProt
BC096379 AAH96379 Q8BG22
AY161007 AAO18366 Q8BG22
AK028704 BAC26076 Q8BG22
AK035512 BAC29086 Q8BG22
AK048276 BAC33291 Q8BG22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clca5 NP_848812 R.norvegicus Clca5 308016   NP_001100920 88
H.sapiens CLCA2 9635 Gene Info NP_006527 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)